CDS

Accession Number TCMCG007C48153
gbkey CDS
Protein Id XP_009108417.1
Location join(11473149..11474187,11474190..11474929)
Gene LOC103834110
GeneID 103834110
Organism Brassica rapa

Protein

Length 593aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009110169.3
Definition LOW QUALITY PROTEIN: probable carotenoid cleavage dioxygenase 4, chloroplastic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category Q
Description dioxygenase 4
KEGG_TC -
KEGG_Module M00372        [VIEW IN KEGG]
KEGG_Reaction R06952        [VIEW IN KEGG]
R06953        [VIEW IN KEGG]
R09682        [VIEW IN KEGG]
KEGG_rclass RC00912        [VIEW IN KEGG]
RC01690        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09840        [VIEW IN KEGG]
EC 1.13.11.51        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0010287        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACTCTGTTTCTTCCTCTTCCTTCATCTCTACATTCTCTCCTAAACCATCTCTTCATCTTCGCCACTCATCTTCCTCTCGTCTTCTTCCCCGTATCAACTCCACCGTCGTCGAAGAACGAGCCCCGATCATTAACCCAAGCGAAAACAATGGCCCTCCTCATAAGAAACTCTACACTCGGTCTAACCGCAACGCAGTTGCATCTCCGGCGAAACTCCGACCAGAAACGACTCTCGTAACAGCTCTCTTCACCACCGTCGAAGACGTAATCAACACGTTCATCGATCCACCGTCACGTCCTTCCGTAGATCCAAAACACGTTCTCTCAGGTAACTTCGCTCCTGTTCTCGACGAGCTTCCTCCAACGGAATGTGAGATCATCCACGGCTCTCTTCCTCCGTCTCTTGACGGCGCTTACATCCGTAACGGCCCGAACCCACAGTTTCTCCCCCGTGGTCCTTACCACCTATTCGACGGTGACGGCATGCTTCACGCGATTCGTATCCGTAATGGTAAAGCCACGCTCTGTAGCAGATTCGTCAAGACTTATAAGTACAACGTCGAGAAACAAAACGGAGCTCCCGTGATCCCTAACGTGTTTTCCGGATTTAACGGCGTGACGGCTTCGGTTGCTCGTGGAGCTTTAACGGCGTTAAGGGTTTTAGCGGGACAGTATAATCCGGTCAACGGCATTGGTTTGGCTAATACGAGTCTAGCTTTCTTCTGTAACCGTCTCTTCGCTTTAGGAGAATCTGATTTACCCTACGCCGTAAGATTAACGAACACTGGAGATATTGAAACGATCGGACGGTTCGATTTCGGCGGGAAGTTAGAGATGAGCATGACAGCTCACCCGAAAACCGATCCTCAAACCGGAGAAACGTTCGCTTTCCGGTACAGTCCGGTTCCACCGTTTTTAACGTTTTTCCGGTTTGATTCAACCGGGAAGAAACAAAGAGACGTTCCGGTTTACTCCTTGACGTCTCCATCGTTCGTTCACGACTTCGCGATCACGAAGAGGCACGCAATCTTCGCGGATCAGATCGTGATGAGGATGAATATAATGGATCTGGTGCTCGAGGGGGGATCTCCGGTTGGTGCTGACAACCGGAAAACGCCGCGGCTCGGAGTGATTCCTCGTTACGCCGGCGATGATTCGGAGATGAAATGGTTTGAAGTTCCTGGATTCAACATCATTCACGCTATCAATGCTTGGGATGAAAACGATGGAAACGCCGTCGTTTTGATCGCTCCGAATATTATGTCCATCGAGCATACATTAGAGAGGATGGATCTCGTTCACTCCTTGGTGGAGAAGGTGAAGATCGATCTCGTCACCGGAATCGTGACACGTCATCCGATCTCCGCGAGGCACCTCGATTTCGCGGTGATCAATCCGGCGTTTCTCGGGAGACGGAGCCGGTACGTGTACGCGGCGATCGGGGATCCGATGCCGAAGATCTCCGGAGTGGTGAAGCTCGACGTGAGTAAAGGCGATCGGGATGATTGCACGGTGGCGCGTAGAATGTACGGTCCAGGCTGTTACGGCGGCGAACCGTTTTTCGTAGCGAGGGATCCTGGTGATCAGGAGGCAGAGGAGGATGACGGTTACGTGGTGACATATGTTCACGATGAGGTGGCTGGAGAGTCGAAGTTTTTGGTGATGGACGCGAAGTCGCCGGAGCTTGAAATCGTCGCGGCCGTGAGGTTGCCGCGAAGGGTTCCGTACGGATTCCACGGACTATTTGTAAAGGAGAGCGACATTAATAAGCTTTAA
Protein:  
MYSVSSSSFISTFSPKPSLHLRHSSSSRLLPRINSTVVEERAPIINPSENNGPPHKKLYTRSNRNAVASPAKLRPETTLVTALFTTVEDVINTFIDPPSRPSVDPKHVLSGNFAPVLDELPPTECEIIHGSLPPSLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIRIRNGKATLCSRFVKTYKYNVEKQNGAPVIPNVFSGFNGVTASVARGALTALRVLAGQYNPVNGIGLANTSLAFFCNRLFALGESDLPYAVRLTNTGDIETIGRFDFGGKLEMSMTAHPKTDPQTGETFAFRYSPVPPFLTFFRFDSTGKKQRDVPVYSLTSPSFVHDFAITKRHAIFAEXQIVMRMNIMDLVLEGGSPVGADNRKTPRLGVIPRYAGDDSEMKWFEVPGFNIIHAINAWDENDGNAVVLIAPNIMSIEHTLERMDLVHSLVEKVKIDLVTGIVTRHPISARHLDFAVINPAFLGRRSRYVYAAIGDPMPKISGVVKLDVSKGDRDDCTVARRMYGPGCYGGEPFFVARDPGDQEAEEDDGYVVTYVHDEVAGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDINKL